Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL022319.1-201ENST00000458183 1167 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 RPSAP37-201ENST00000470913 821 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 RPL23AP40-201ENST00000487630 390 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 AC114322.1-201ENST00000506771 926 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 SNORA26.10-201ENST00000516427 141 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 AC135626.1-201ENST00000556983 435 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 AC091078.2-201ENST00000557145 559 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 AP001496.3-201ENST00000580230 913 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 AC009948.4-201ENST00000604692 675 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 AC104307.1-201ENST00000616142 196 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 AC009948.3-201ENST00000603415 1798 ntBASIC7.07□□□□□ -1.28
HLA-DOAP06340 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-DOAP06340 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-DOAP06340 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-DOAP06340 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
HLA-DOAP06340 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-DOAP06340 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 OR13C1P-202ENST00000641378 2919 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC062029.1-202ENST00000606164 3651 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 RNA5SP500-201ENST00000364486 119 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 AK4P4-201ENST00000419465 646 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC064862.4-201ENST00000442180 334 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 RAD1P2-201ENST00000446414 663 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 RPL7L1P3-201ENST00000455249 689 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC015908.1-201ENST00000478739 476 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC124945.1-201ENST00000485133 188 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 AP001960.1-201ENST00000506494 658 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 RN7SKP98-201ENST00000517070 156 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC027544.3-201ENST00000535082 757 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC023158.1-201ENST00000561632 1025 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 BNIP3P27-201ENST00000599991 412 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC098483.2-201ENST00000603158 454 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC009237.12-201ENST00000604755 742 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 RPL12P48-201ENST00000605620 304 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 AL512506.1-201ENST00000613918 449 ntBASIC7.06□□□□□ -1.28
HLA-DOAP06340 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.06□□□□□ -1.28
HLA-DOAP06340 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-DOAP06340 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 TMEM75-201ENST00000624314 2165 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-DOAP06340 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-DOAP06340 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-DOAP06340 SNORA51.1-201ENST00000363243 140 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 GABARAPL3-201ENST00000412799 354 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 AC099677.3-201ENST00000427081 395 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms