Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 OR4G2P-201ENST00000328113 903 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 RN7SKP130-201ENST00000364924 301 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 RNU6-1200P-201ENST00000384162 107 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AL139806.1-201ENST00000403057 1002 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 RPS27AP7-201ENST00000422792 455 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 COX6CP2-201ENST00000444980 225 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AP002884.1-201ENST00000479691 655 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 OR4G11P-201ENST00000492842 939 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC002456.2-201ENST00000509356 380 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 RNU6-1334P-201ENST00000516032 105 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 IGLC4-201ENST00000517690 248 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 OR1E3-201ENST00000575608 948 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 GLUD1P2-201ENST00000583339 201 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 GLUD1P8-201ENST00000585063 203 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC091805.2-201ENST00000603848 235 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC011891.2-201ENST00000604949 397 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC097381.3-201ENST00000608962 462 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AL607023.1-201ENST00000620045 248 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 AC089999.3-201ENST00000622440 577 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.74□□□□□ -1.01
ZC3H4Q9UPT8 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 Y_RNA.303-201ENST00000364998 94 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 RN7SKP189-201ENST00000365042 330 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC000089.1-201ENST00000424559 801 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC097721.1-201ENST00000427150 1253 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC005040.1-201ENST00000437783 482 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AL592437.1-201ENST00000443781 492 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 WASF1P1-201ENST00000447560 1131 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 RPSAP7-201ENST00000456871 885 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC084024.2-201ENST00000503480 791 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC018797.1-201ENST00000510791 255 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 KCTD9P6-201ENST00000522306 950 ntBASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC8.73□□□□□ -1.01
ZC3H4Q9UPT8 NAP1L1P1-201ENST00000524793 1063 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms