Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 FUNDC2P3-201ENST00000334716 533 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 RNU5B-1-201ENST00000363286 116 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 RNU6-906P-201ENST00000384700 70 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 ATP5HP3-201ENST00000396994 486 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 GAPDHP15-201ENST00000398586 975 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AL603865.2-201ENST00000401679 213 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 RN7SKP146-201ENST00000410242 334 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 USP9YP21-201ENST00000420603 432 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 RPL31P11-202ENST00000454082 372 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 SRP68P2-201ENST00000456184 254 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 BX323845.2-201ENST00000458382 234 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 RN7SL518P-201ENST00000491887 280 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AP001804.1-201ENST00000526868 919 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AL356801.1-201ENST00000559320 294 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 SNORD39.2-201ENST00000579995 76 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC012254.4-201ENST00000588843 273 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC092960.1-201ENST00000604762 351 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 Z99289.3-201ENST00000605586 594 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AP000577.1-201ENST00000624366 878 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 OR7E161P-202ENST00000641994 1033 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 ZNF402P-201ENST00000404435 3100 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AC110373.1-201ENST00000505994 3505 ntBASIC6.36□□□□□ -1.39
CCM2LQ9NUG4 AP002800.1-201ENST00000624982 2225 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 AC105749.1-201ENST00000631338 2008 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 MIR187-201ENST00000385062 109 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 RNU1-56P-201ENST00000391303 164 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 AC097721.1-201ENST00000427150 1253 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 CHCHD4P5-201ENST00000436684 427 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 MRPS21P3-201ENST00000436696 262 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 NANOGP9-201ENST00000439890 892 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 VN1R25P-201ENST00000443385 738 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 CCNJP1-201ENST00000450600 1149 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.35□□□□□ -1.39
CCM2LQ9NUG4 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms