Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC096921.1-201ENST00000411661 375 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 RNGTTP1-201ENST00000420965 728 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 YY1P1-201ENST00000427625 668 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AC099670.2-201ENST00000435130 321 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 CLNS1AP1-201ENST00000435954 682 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 CTSLP6-201ENST00000458273 1002 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AP002884.1-201ENST00000479691 655 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AC099521.1-201ENST00000482557 334 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AC009120.1-201ENST00000493458 473 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 HMGN2P36-201ENST00000529541 409 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 HSPE1P2-201ENST00000554777 306 ntBASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
SIX2Q9NPC8 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 IFIT1P1-201ENST00000400497 1449 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC023632.6-201ENST00000624338 2177 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 WDR95P-201ENST00000425638 1542 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 MIR1203-201ENST00000408812 85 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC110602.1-201ENST00000437414 318 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC083899.1-201ENST00000454465 3819 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 RPL32P33-201ENST00000487023 394 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 RPL37P23-201ENST00000492641 294 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 OR7E157P-201ENST00000494376 911 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 RPS17P5-201ENST00000498293 408 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC011853.1-201ENST00000518911 454 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AP000648.1-201ENST00000529682 397 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AL031601.1-201ENST00000605702 394 ntBASIC6.17□□□□□ -1.42
SIX2Q9NPC8 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIX2Q9NPC8 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 UGT2B24P-201ENST00000514441 1597 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC005042.1-201ENST00000393397 800 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AL354868.1-201ENST00000417077 482 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 BX276092.6-201ENST00000430476 250 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC126120.1-201ENST00000431082 470 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AL359839.1-201ENST00000451975 1160 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 BX276092.8-201ENST00000455722 250 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC122718.2-201ENST00000505325 591 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 MTCO3P42-201ENST00000509488 518 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC114781.3-201ENST00000512083 142 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 MTCO3P39-201ENST00000514812 518 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 SNORA81.2-201ENST00000516868 170 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC007066.2-202ENST00000566531 914 ntBASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.16□□□□□ -1.42
SIX2Q9NPC8 AL353729.2-201ENST00000605859 1249 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms