Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AMZ2P2-201ENST00000406819 1057 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AC023141.6-201ENST00000429418 337 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 RAB9AP5-201ENST00000437794 597 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 RAB9AP2-201ENST00000443911 597 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AC098818.1-201ENST00000478593 252 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 RPL34P33-201ENST00000486062 334 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AP002453.1-201ENST00000492327 668 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AC108103.1-201ENST00000511286 446 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 ZNF519P4-201ENST00000514008 125 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 RFPL4AP3-201ENST00000515267 345 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 RNA5SP441-201ENST00000516809 88 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AC074029.2-201ENST00000551045 634 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AC027281.1-201ENST00000574178 758 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AC138207.8-204ENST00000579588 527 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 DNAJC19P3-201ENST00000594491 331 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AP001823.1-201ENST00000604056 1003 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AC005828.7-201ENST00000607331 556 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 uc_338.29-201ENST00000615099 168 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AL137067.2-201ENST00000621202 131 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AC005261.6-201ENST00000623072 1387 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 AC087565.3-202ENST00000642085 1603 ntBASIC6.94□□□□□ -1.3
CDK5RAP3Q96JB5 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AL353625.1-202ENST00000366273 571 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 RNA5SP156-201ENST00000410250 110 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 THEM7P-201ENST00000419556 672 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC099782.1-201ENST00000425889 474 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 TXNP2-201ENST00000443918 295 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 RAB28P2-201ENST00000454299 641 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 CTSLP6-201ENST00000458273 1002 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 OR7E22P-201ENST00000478335 1035 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 RPL12P30-201ENST00000488389 499 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC090958.1-201ENST00000511122 351 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC020916.2-201ENST00000591242 360 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 BNIP3P27-201ENST00000599991 412 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC125494.2-201ENST00000602431 657 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AL135999.3-201ENST00000610501 812 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC097372.4-201ENST00000625025 466 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 AC024587.1-201ENST00000505925 2157 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 EIF3EP1-201ENST00000433978 1316 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms