Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC027176.2-201ENST00000559166 746 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC006116.7-201ENST00000590141 756 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 IMMP1LP3-201ENST00000604197 224 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 MIR6809-201ENST00000612189 116 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AC016597.2-201ENST00000613256 341 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 AL596275.2-208ENST00000641192 594 ntBASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.52□□□□□ -1.21
SMC1BQ8NDV3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 OR4C1P-202ENST00000641065 1569 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 RBMY1HP-201ENST00000382759 1389 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 SNORA56-201ENST00000383966 129 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AL050305.1-201ENST00000399993 1230 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 OR7E101P-201ENST00000400428 513 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AL049697.3-201ENST00000406493 982 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AMZ2P2-201ENST00000406819 1057 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 MIR1286-201ENST00000408112 78 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC019205.1-201ENST00000421830 730 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 CFL1P1-202ENST00000432948 411 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AL122020.1-201ENST00000472287 459 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC090589.1-201ENST00000473109 362 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 C1GALT1P2-201ENST00000510813 1104 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 SNORA70.20-201ENST00000516848 126 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC079148.1-201ENST00000565944 819 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC104072.1-201ENST00000568817 668 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC005332.4-201ENST00000592752 579 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AP001885.1-201ENST00000621658 558 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AP000577.1-201ENST00000624366 878 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 CUBNP3-201ENST00000457461 1784 ntBASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.51□□□□□ -1.21
SMC1BQ8NDV3 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AP000866.6-201ENST00000638898 3579 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 PTGES3P2-201ENST00000407942 482 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 SRSF1P1-201ENST00000424058 520 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 BX119917.1-201ENST00000432517 502 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 MORF4L1P5-201ENST00000433352 961 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AL645638.1-201ENST00000440519 361 ntBASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.5□□□□□ -1.21
SMC1BQ8NDV3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms