Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC096775.1-201ENST00000437724 448 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 HIGD1AP16-201ENST00000450986 258 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AP002371.1-201ENST00000463604 433 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 DEFB109A-201ENST00000482450 265 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 KHDC1P1-201ENST00000511053 508 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC114940.1-201ENST00000512162 1265 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 OR56A7P-201ENST00000524865 941 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC008055.1-201ENST00000547032 609 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC010503.3-201ENST00000594355 540 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC002069.2-201ENST00000603580 883 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 QTRT1P1-201ENST00000604344 1078 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC096586.2-201ENST00000610260 441 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AL589743.6-201ENST00000611025 117 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 AC018809.2-201ENST00000602436 3823 ntBASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RCL1Q9Y2P8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 ABCC13-202ENST00000463099 3842 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 CR383656.5-201ENST00000547616 1340 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 RN7SKP257-201ENST00000364525 309 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 RN7SKP81-201ENST00000365603 331 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 SNORA7A-201ENST00000384765 139 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 RNA5SP91-201ENST00000390902 119 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC026310.1-201ENST00000396004 378 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AL139135.1-201ENST00000412675 209 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 RPS7P8-201ENST00000418311 581 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 OR3D1P-201ENST00000438288 955 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AL663074.2-201ENST00000440621 479 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 RPS7P4-201ENST00000444127 582 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 CTSLP6-201ENST00000458273 1002 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC006539.1-201ENST00000481419 501 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 RN7SL413P-201ENST00000482700 297 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 GM2AP2-201ENST00000491764 562 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 RNA5SP206-201ENST00000516703 121 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AP004609.2-201ENST00000532177 190 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 AC006453.3-201ENST00000635891 377 ntBASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RCL1Q9Y2P8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms