Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SUMO2P8-201ENST00000434672 286 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC096632.2-201ENST00000438139 1239 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 PPIAP32-201ENST00000449940 472 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 NPM1P19-201ENST00000450070 712 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AL354872.1-201ENST00000456361 967 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 UOX-201ENST00000471089 899 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 RN7SL350P-201ENST00000492591 299 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AL049874.2-201ENST00000492636 288 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC009567.2-201ENST00000502989 349 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 RNU6-513P-201ENST00000516104 104 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 IGLV3-24-201ENST00000517477 197 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 IGHV4-55-201ENST00000520889 368 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 OR4A17P-201ENST00000526032 904 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 CASP1P2-201ENST00000526830 1258 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC023968.1-201ENST00000560719 475 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 OOSP1P2-201ENST00000579644 351 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC100832.2-201ENST00000582080 776 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AL049840.6-201ENST00000604583 345 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 NANOGP3-201ENST00000605855 286 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 SNORD96A-201ENST00000606577 79 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC061999.1-201ENST00000624454 177 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 LINC02495-203ENST00000636704 242 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AL133243.2-201ENST00000610331 1621 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 TCP1P3-201ENST00000414406 1498 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 RN7SKP191-201ENST00000364713 306 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 TRAV35-201ENST00000390462 330 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC019178.1-201ENST00000392337 440 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC096921.1-201ENST00000411661 375 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 VN1R21P-201ENST00000426703 765 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 VN1R53P-201ENST00000429536 957 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 PSMD8P1-201ENST00000436275 769 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC096775.1-201ENST00000437724 448 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 NPM1P23-201ENST00000440193 849 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 CCNJP1-201ENST00000450600 1149 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 NPM1P9-201ENST00000453156 844 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 RN7SL372P-201ENST00000461982 298 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AL603882.1-201ENST00000463059 681 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 MTCO1P55-201ENST00000489829 745 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC131935.1-201ENST00000524621 333 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC068993.1-201ENST00000546724 589 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 MIR4472-2-201ENST00000582069 67 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 MIR7853-201ENST00000584820 132 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC119403.2-201ENST00000590960 598 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC005332.4-201ENST00000592752 579 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC036176.3-201ENST00000602456 418 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 HIRAP1-201ENST00000605318 787 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC141002.1-201ENST00000607025 279 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 MIR6883-201ENST00000614952 78 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AC241377.1-201ENST00000619797 406 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms