Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC8.82□□□□□ -1
RAPGEF3O95398 AC112255.1-201ENST00000624070 2493 ntBASIC8.82□□□□□ -1
RAPGEF3O95398 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.82□□□□□ -1
RAPGEF3O95398 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RAPGEF3O95398 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
RAPGEF3O95398 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC8.81□□□□□ -1
RAPGEF3O95398 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.81□□□□□ -1
RAPGEF3O95398 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.81□□□□□ -1
RAPGEF3O95398 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.81□□□□□ -1
RAPGEF3O95398 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC8.81□□□□□ -1
RAPGEF3O95398 RNA5SP350-201ENST00000363298 111 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 HIST1H3PS1-201ENST00000404612 417 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 AL390774.1-201ENST00000411924 246 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 VDAC1P2-201ENST00000423609 850 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 AC099677.3-201ENST00000427081 395 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 MTATP6P11-201ENST00000428071 670 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 VDAC1P6-201ENST00000430062 855 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC8.81□□□□□ -1
RAPGEF3O95398 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC8.81□□□□□ -1
RAPGEF3O95398 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC8.81□□□□□ -1
RAPGEF3O95398 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC8.81□□□□□ -1
RAPGEF3O95398 TAAR4P-201ENST00000454843 1039 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.81□□□□□ -1
RAPGEF3O95398 RPS29P22-201ENST00000472363 168 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC8.81□□□□□ -1
RAPGEF3O95398 AP000662.1-201ENST00000530952 487 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC8.81□□□□□ -1
RAPGEF3O95398 AC103968.1-201ENST00000557841 573 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.81□□□□□ -1
RAPGEF3O95398 AC015818.6-201ENST00000584274 634 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 AC139493.1-201ENST00000604368 397 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 AC126915.2-201ENST00000610957 190 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC8.81□□□□□ -1
RAPGEF3O95398 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.81□□□□□ -1
RAPGEF3O95398 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
RAPGEF3O95398 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 AC007938.2-201ENST00000604666 2634 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
RAPGEF3O95398 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
RAPGEF3O95398 AC137056.2-201ENST00000624055 1958 ntBASIC8.81□□□□□ -1
RAPGEF3O95398 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.81□□□□□ -1
RAPGEF3O95398 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.81□□□□□ -1
RAPGEF3O95398 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC8.8□□□□□ -1
RAPGEF3O95398 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.8□□□□□ -1
RAPGEF3O95398 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.8□□□□□ -1
RAPGEF3O95398 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.8□□□□□ -1
RAPGEF3O95398 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
RAPGEF3O95398 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 AC083799.1-201ENST00000366451 910 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 ADIG-201ENST00000373348 430 ntTSL 2 BASIC8.8□□□□□ -1
RAPGEF3O95398 MRRF-207ENST00000373729 870 ntTSL 3 BASIC8.8□□□□□ -1
RAPGEF3O95398 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC8.8□□□□□ -1
RAPGEF3O95398 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC8.8□□□□□ -1
RAPGEF3O95398 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC8.8□□□□□ -1
RAPGEF3O95398 NDUFA5P8-201ENST00000449019 346 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 AP000547.1-201ENST00000454360 617 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 AC103563.5-201ENST00000455643 364 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 RPS18P6-201ENST00000476880 458 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 RPL7P6-201ENST00000480903 738 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 AC093267.1-201ENST00000489176 961 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC8.8□□□□□ -1
RAPGEF3O95398 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.8□□□□□ -1
RAPGEF3O95398 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.8□□□□□ -1
RAPGEF3O95398 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC8.8□□□□□ -1
RAPGEF3O95398 AC139365.2-201ENST00000517972 253 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.8□□□□□ -1
RAPGEF3O95398 AC022832.1-201ENST00000530718 645 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC8.8□□□□□ -1
RAPGEF3O95398 AC079075.1-201ENST00000559543 878 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC8.8□□□□□ -1
RAPGEF3O95398 MRPS21P7-201ENST00000566937 238 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC8.8□□□□□ -1
RAPGEF3O95398 AC023389.2-201ENST00000580031 955 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 MIR4480-201ENST00000582492 71 ntBASIC8.8□□□□□ -1
RAPGEF3O95398 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC8.8□□□□□ -1
RAPGEF3O95398 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.8□□□□□ -1
RAPGEF3O95398 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RAPGEF3O95398 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms