Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
UBA52P62987 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
UBA52P62987 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
UBA52P62987 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.21□□□□□ -1.57
UBA52P62987 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
UBA52P62987 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
UBA52P62987 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.21□□□□□ -1.58
UBA52P62987 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.21□□□□□ -1.58
UBA52P62987 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.21□□□□□ -1.58
UBA52P62987 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.21□□□□□ -1.58
UBA52P62987 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.21□□□□□ -1.58
UBA52P62987 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBA52P62987 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBA52P62987 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
UBA52P62987 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
UBA52P62987 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
UBA52P62987 U3.10-201ENST00000364459 214 ntBASIC5.21□□□□□ -1.58
UBA52P62987 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
UBA52P62987 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.21□□□□□ -1.58
UBA52P62987 IGLV3-4-201ENST00000432300 244 ntBASIC5.21□□□□□ -1.58
UBA52P62987 AC003989.1-201ENST00000434569 565 ntBASIC5.21□□□□□ -1.58
UBA52P62987 AC099670.2-201ENST00000435130 321 ntBASIC5.21□□□□□ -1.58
UBA52P62987 EMC3-AS1-205ENST00000438698 534 ntBASIC5.21□□□□□ -1.58
UBA52P62987 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.21□□□□□ -1.58
UBA52P62987 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.21□□□□□ -1.58
UBA52P62987 CXCR2P1-202ENST00000443392 1074 ntBASIC5.21□□□□□ -1.58
UBA52P62987 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.21□□□□□ -1.58
UBA52P62987 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.21□□□□□ -1.58
UBA52P62987 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
UBA52P62987 AC104109.1-201ENST00000498563 436 ntBASIC5.21□□□□□ -1.58
UBA52P62987 AC105420.1-201ENST00000504389 582 ntBASIC5.21□□□□□ -1.58
UBA52P62987 AC131392.1-201ENST00000506490 633 ntBASIC5.21□□□□□ -1.58
UBA52P62987 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.21□□□□□ -1.58
UBA52P62987 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.21□□□□□ -1.58
UBA52P62987 AC111000.6-201ENST00000514471 709 ntBASIC5.21□□□□□ -1.58
UBA52P62987 RNA5SP400-201ENST00000517155 111 ntBASIC5.21□□□□□ -1.58
UBA52P62987 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.21□□□□□ -1.58
UBA52P62987 OR4A43P-201ENST00000532938 908 ntBASIC5.21□□□□□ -1.58
UBA52P62987 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.21□□□□□ -1.58
UBA52P62987 AC008055.1-201ENST00000547032 609 ntBASIC5.21□□□□□ -1.58
UBA52P62987 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.21□□□□□ -1.58
UBA52P62987 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.21□□□□□ -1.58
UBA52P62987 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.21□□□□□ -1.58
UBA52P62987 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.21□□□□□ -1.58
UBA52P62987 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.21□□□□□ -1.58
UBA52P62987 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.21□□□□□ -1.58
UBA52P62987 AC108865.2-201ENST00000606881 432 ntBASIC5.21□□□□□ -1.58
UBA52P62987 MIR6085-201ENST00000618314 110 ntBASIC5.21□□□□□ -1.58
UBA52P62987 AP001264.1-201ENST00000620602 703 ntBASIC5.21□□□□□ -1.58
UBA52P62987 AC018692.2-201ENST00000624130 348 ntBASIC5.21□□□□□ -1.58
UBA52P62987 OR7E91P-202ENST00000642062 1198 ntBASIC5.21□□□□□ -1.58
UBA52P62987 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.21□□□□□ -1.58
UBA52P62987 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
UBA52P62987 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
UBA52P62987 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBA52P62987 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBA52P62987 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBA52P62987 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
UBA52P62987 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.2□□□□□ -1.58
UBA52P62987 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.2□□□□□ -1.58
UBA52P62987 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.2□□□□□ -1.58
UBA52P62987 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
UBA52P62987 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
UBA52P62987 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
UBA52P62987 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
UBA52P62987 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.2□□□□□ -1.58
UBA52P62987 RPL5P20-201ENST00000403848 896 ntBASIC5.2□□□□□ -1.58
UBA52P62987 SNORA11B-201ENST00000408175 129 ntBASIC5.2□□□□□ -1.58
UBA52P62987 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.2□□□□□ -1.58
UBA52P62987 AC117434.1-201ENST00000419971 836 ntBASIC5.2□□□□□ -1.58
UBA52P62987 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.2□□□□□ -1.58
UBA52P62987 IPPKP1-201ENST00000422501 768 ntBASIC5.2□□□□□ -1.58
UBA52P62987 NPM1P18-201ENST00000434232 732 ntBASIC5.2□□□□□ -1.58
UBA52P62987 PNKDP1-201ENST00000435914 430 ntBASIC5.2□□□□□ -1.58
UBA52P62987 AL645936.1-201ENST00000441979 518 ntBASIC5.2□□□□□ -1.58
UBA52P62987 AC010240.2-201ENST00000445363 1205 ntBASIC5.2□□□□□ -1.58
UBA52P62987 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.2□□□□□ -1.58
UBA52P62987 SETP20-201ENST00000457046 852 ntBASIC5.2□□□□□ -1.58
UBA52P62987 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.2□□□□□ -1.58
UBA52P62987 RPL7P51-201ENST00000490532 749 ntBASIC5.2□□□□□ -1.58
UBA52P62987 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.2□□□□□ -1.58
UBA52P62987 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.2□□□□□ -1.58
UBA52P62987 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBA52P62987 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.2□□□□□ -1.58
UBA52P62987 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.2□□□□□ -1.58
UBA52P62987 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.2□□□□□ -1.58
UBA52P62987 AC090286.3-201ENST00000573133 187 ntBASIC5.2□□□□□ -1.58
UBA52P62987 AC012146.2-201ENST00000576545 416 ntBASIC5.2□□□□□ -1.58
UBA52P62987 AC007448.1-201ENST00000582714 234 ntBASIC5.2□□□□□ -1.58
UBA52P62987 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.2□□□□□ -1.58
UBA52P62987 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.2□□□□□ -1.58
UBA52P62987 SNX18P12-201ENST00000624821 759 ntBASIC5.2□□□□□ -1.58
UBA52P62987 LINC02495-203ENST00000636704 242 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms