Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NR1H2P55055 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
NR1H2P55055 AC024651.2-201ENST00000562480 2098 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.02□□□□□ -1.45
NR1H2P55055 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.02□□□□□ -1.45
NR1H2P55055 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NR1H2P55055 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 RN7SKP171-201ENST00000364417 303 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 RN7SKP130-201ENST00000364924 301 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 AL034403.1-201ENST00000399414 885 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AL353133.1-201ENST00000407695 401 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 RNU2-72P-201ENST00000411175 163 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AL445213.1-201ENST00000412589 747 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 RPL7AP51-201ENST00000422016 760 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 SPATA20P1-201ENST00000423089 438 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.02□□□□□ -1.45
NR1H2P55055 AL365220.1-201ENST00000432923 399 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 AL590399.4-201ENST00000436561 601 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 NPM1P23-201ENST00000440193 849 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 AL031681.1-201ENST00000443304 400 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.02□□□□□ -1.45
NR1H2P55055 AC093166.3-201ENST00000448785 303 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 MTND2P25-201ENST00000449028 610 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 AC107015.1-201ENST00000466902 747 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 AC098818.1-201ENST00000478593 252 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 RN7SL654P-201ENST00000479178 292 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC093719.1-201ENST00000480427 441 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 RN7SL187P-201ENST00000495587 303 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.02□□□□□ -1.45
NR1H2P55055 AC021087.2-201ENST00000504656 1203 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 MTCYBP44-201ENST00000514835 823 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 AC008429.4-201ENST00000521201 182 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.02□□□□□ -1.45
NR1H2P55055 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.02□□□□□ -1.45
NR1H2P55055 LINC00556-201ENST00000569603 412 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.02□□□□□ -1.45
NR1H2P55055 GLYATL1P2-202ENST00000588046 902 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC005972.3-201ENST00000606304 481 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC092574.1-201ENST00000609771 420 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AP005212.3-201ENST00000619964 528 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC069234.4-201ENST00000621276 412 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC005858.3-201ENST00000624756 589 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 AC006453.5-201ENST00000636451 619 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
NR1H2P55055 AC007842.1-201ENST00000597336 2039 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NR1H2P55055 PPBPP2-201ENST00000513150 1362 ntBASIC6.02□□□□□ -1.45
NR1H2P55055 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.02□□□□□ -1.45
NR1H2P55055 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
NR1H2P55055 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NR1H2P55055 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.02□□□□□ -1.45
NR1H2P55055 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.02□□□□□ -1.45
NR1H2P55055 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 CASC19-281ENST00000642118 1554 ntBASIC6.01□□□□□ -1.45
NR1H2P55055 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.01□□□□□ -1.45
NR1H2P55055 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
NR1H2P55055 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NR1H2P55055 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.01□□□□□ -1.45
NR1H2P55055 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NR1H2P55055 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.01□□□□□ -1.45
NR1H2P55055 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
NR1H2P55055 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.01□□□□□ -1.45
NR1H2P55055 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
NR1H2P55055 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
NR1H2P55055 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NR1H2P55055 AC022164.1-201ENST00000568767 2673 ntBASIC6.01□□□□□ -1.45
NR1H2P55055 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
NR1H2P55055 AC007342.7-201ENST00000624610 2337 ntBASIC6.01□□□□□ -1.45
NR1H2P55055 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NR1H2P55055 AC010894.1-201ENST00000313760 361 ntBASIC6.01□□□□□ -1.45
NR1H2P55055 SNORA7A-201ENST00000384765 139 ntBASIC6.01□□□□□ -1.45
NR1H2P55055 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.01□□□□□ -1.45
NR1H2P55055 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.01□□□□□ -1.45
NR1H2P55055 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.01□□□□□ -1.45
NR1H2P55055 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.01□□□□□ -1.45
NR1H2P55055 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.01□□□□□ -1.45
NR1H2P55055 AL354766.1-201ENST00000423396 542 ntBASIC6.01□□□□□ -1.45
NR1H2P55055 MTND2P21-201ENST00000436242 1042 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms