Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn9Q9Z0S7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Gm715-201ENSMUST00000117865 831 ntBASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Il3ra-202ENSMUST00000223589 738 ntBASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Gm10812-201ENSMUST00000099864 546 ntBASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn9Q9Z0S7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Gm27011-201ENSMUST00000182352 972 ntBASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn9Q9Z0S7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Odf3b-204ENSMUST00000227834 930 ntBASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.28■□□□□ 0.2
Cldn9Q9Z0S7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn9Q9Z0S7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn9Q9Z0S7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn9Q9Z0S7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn9Q9Z0S7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn9Q9Z0S7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn9Q9Z0S7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.27■□□□□ 0.19
Cldn9Q9Z0S7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn9Q9Z0S7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Cldn9Q9Z0S7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.26■□□□□ 0.19
Cldn9Q9Z0S7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms