Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn3Q9Z0G9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn3Q9Z0G9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn3Q9Z0G9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn3Q9Z0G9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Mir6982-201ENSMUST00000184354 68 ntBASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn3Q9Z0G9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Cldn3Q9Z0G9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cldn3Q9Z0G9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cldn3Q9Z0G9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.13■□□□□ 0.33
Cldn3Q9Z0G9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms