Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx1Q9WV80 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx1Q9WV80 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx1Q9WV80 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx1Q9WV80 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Snx1Q9WV80 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.58■□□□□ 0.4
Snx1Q9WV80 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx1Q9WV80 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx1Q9WV80 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx1Q9WV80 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.58■□□□□ 0.4
Snx1Q9WV80 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx1Q9WV80 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Gm18284-201ENSMUST00000172604 624 ntBASIC17.57■□□□□ 0.4
Snx1Q9WV80 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Snx1Q9WV80 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx1Q9WV80 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.56■□□□□ 0.4
Snx1Q9WV80 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx1Q9WV80 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Dancr-204ENSMUST00000132389 2347 ntBASIC17.55■□□□□ 0.4
Snx1Q9WV80 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Gm13216-201ENSMUST00000117145 591 ntBASIC17.55■□□□□ 0.4
Snx1Q9WV80 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Mir5133-201ENSMUST00000174955 77 ntBASIC17.55■□□□□ 0.4
Snx1Q9WV80 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.55■□□□□ 0.4
Snx1Q9WV80 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx1Q9WV80 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.54■□□□□ 0.4
Snx1Q9WV80 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.54■□□□□ 0.4
Snx1Q9WV80 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx1Q9WV80 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx1Q9WV80 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Snx1Q9WV80 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx1Q9WV80 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.53■□□□□ 0.4
Snx1Q9WV80 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms