Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Gm24841-201ENSMUST00000158676 357 ntBASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Gm18733-201ENSMUST00000173950 856 ntBASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Gm27459-201ENSMUST00000184860 107 ntBASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Gm43347-201ENSMUST00000200226 580 ntBASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col13a1Q9R1N9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Col13a1Q9R1N9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Gm18206-201ENSMUST00000207027 926 ntBASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col13a1Q9R1N9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Col13a1Q9R1N9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col13a1Q9R1N9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Col13a1Q9R1N9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms