Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Gm7284-201ENSMUST00000131667 944 ntBASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom3Q9QXN0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom3Q9QXN0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Gm27000-201ENSMUST00000182943 842 ntBASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shroom3Q9QXN0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shroom3Q9QXN0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Gm16061-201ENSMUST00000122167 857 ntBASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shroom3Q9QXN0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shroom3Q9QXN0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Gm22697-201ENSMUST00000175194 63 ntBASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Shroom3Q9QXN0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms