Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1aQ9QWF0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1aQ9QWF0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19■□□□□ 0.63
Chaf1aQ9QWF0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19■□□□□ 0.63
Chaf1aQ9QWF0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1aQ9QWF0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1aQ9QWF0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1aQ9QWF0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Gm13158-201ENSMUST00000122007 736 ntBASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Gm20049-201ENSMUST00000219950 730 ntBASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chaf1aQ9QWF0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Gm18025-201ENSMUST00000221733 862 ntBASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Chaf1aQ9QWF0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chaf1aQ9QWF0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms