Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1fQ9JIS7 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.23■□□□□ 0.67
Cacna1fQ9JIS7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1fQ9JIS7 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Gm18206-201ENSMUST00000207027 926 ntBASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Gm12497-201ENSMUST00000138778 237 ntBASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cacna1fQ9JIS7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Gm18195-201ENSMUST00000207604 706 ntBASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1fQ9JIS7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1fQ9JIS7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cacna1fQ9JIS7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1fQ9JIS7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1fQ9JIS7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Cacna1fQ9JIS7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.19■□□□□ 0.66
Cacna1fQ9JIS7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1fQ9JIS7 Gm10060-201ENSMUST00000212002 111 ntBASIC19.19■□□□□ 0.66
Cacna1fQ9JIS7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1fQ9JIS7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Gm7230-201ENSMUST00000173026 815 ntBASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1fQ9JIS7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms