Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3bpQ9EQG9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3bpQ9EQG9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Gm15565-201ENSMUST00000118890 427 ntBASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Gm5417-201ENSMUST00000079706 384 ntBASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3bpQ9EQG9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3bpQ9EQG9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col4a3bpQ9EQG9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col4a3bpQ9EQG9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col4a3bpQ9EQG9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3bpQ9EQG9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3bpQ9EQG9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms