Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdhd3Q9CYW4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdhd3Q9CYW4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hdhd3Q9CYW4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hdhd3Q9CYW4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Hdhd3Q9CYW4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hdhd3Q9CYW4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hdhd3Q9CYW4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdhd3Q9CYW4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Gm10418-201ENSMUST00000100943 576 ntBASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Gm2399-201ENSMUST00000104944 225 ntBASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Gm7291-201ENSMUST00000199147 382 ntBASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hdhd3Q9CYW4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hdhd3Q9CYW4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms