Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Gm27405-201ENSMUST00000184201 112 ntBASIC15.71■□□□□ 0.11
Trim13Q9CYB0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim13Q9CYB0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trim13Q9CYB0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim13Q9CYB0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Gm7291-201ENSMUST00000199147 382 ntBASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Gm6365-201ENSMUST00000054711 744 ntBASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim13Q9CYB0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim13Q9CYB0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Gm13216-201ENSMUST00000117145 591 ntBASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Mir2861-201ENSMUST00000175539 82 ntBASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim13Q9CYB0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms