Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Gm27702-201ENSMUST00000184512 56 ntBASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldnd1Q9CQX5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Gm11779-201ENSMUST00000118541 368 ntBASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cldnd1Q9CQX5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldnd1Q9CQX5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldnd1Q9CQX5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldnd1Q9CQX5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldnd1Q9CQX5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cldnd1Q9CQX5 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldnd1Q9CQX5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Gm6736-201ENSMUST00000166583 948 ntBASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Mir5126-201ENSMUST00000175513 77 ntBASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldnd1Q9CQX5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldnd1Q9CQX5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms