Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.46■□□□□ 0.23
Rnf111Q99ML9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.46■□□□□ 0.23
Rnf111Q99ML9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Rnf111Q99ML9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf111Q99ML9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Gm15378-201ENSMUST00000121894 207 ntBASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Gm6576-201ENSMUST00000169678 883 ntBASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rnf111Q99ML9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Gm12382-201ENSMUST00000122005 922 ntBASIC16.43■□□□□ 0.22
Rnf111Q99ML9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Gm10698-201ENSMUST00000182663 604 ntBASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Gm8520-201ENSMUST00000186517 868 ntBASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Gm37292-201ENSMUST00000192062 758 ntBASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf111Q99ML9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf111Q99ML9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms