Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Gm13401-201ENSMUST00000117074 291 ntBASIC14.84□□□□□ -0.03
Scrt1Q99M85 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scrt1Q99M85 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Scrt1Q99M85 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.83□□□□□ -0.03
Scrt1Q99M85 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scrt1Q99M85 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scrt1Q99M85 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scrt1Q99M85 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.83□□□□□ -0.04
Scrt1Q99M85 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scrt1Q99M85 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.82□□□□□ -0.04
Scrt1Q99M85 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Gm27742-201ENSMUST00000184667 60 ntBASIC14.82□□□□□ -0.04
Scrt1Q99M85 Gm43514-201ENSMUST00000198852 424 ntBASIC14.82□□□□□ -0.04
Scrt1Q99M85 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scrt1Q99M85 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.81□□□□□ -0.04
Scrt1Q99M85 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.81□□□□□ -0.04
Scrt1Q99M85 Gm6623-201ENSMUST00000173570 544 ntBASIC14.81□□□□□ -0.04
Scrt1Q99M85 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.81□□□□□ -0.04
Scrt1Q99M85 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Gm6443-201ENSMUST00000203599 874 ntBASIC14.81□□□□□ -0.04
Scrt1Q99M85 Gm34391-201ENSMUST00000203706 907 ntBASIC14.81□□□□□ -0.04
Scrt1Q99M85 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scrt1Q99M85 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms