Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.88■□□□□ 0.45
Clp1Q99LI9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Gm37935-201ENSMUST00000192012 982 ntBASIC17.88■□□□□ 0.45
Clp1Q99LI9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clp1Q99LI9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.88■□□□□ 0.45
Clp1Q99LI9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Gm7862-201ENSMUST00000121461 292 ntBASIC17.87■□□□□ 0.45
Clp1Q99LI9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.87■□□□□ 0.45
Clp1Q99LI9 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.87■□□□□ 0.45
Clp1Q99LI9 Gm6296-201ENSMUST00000222599 943 ntBASIC17.87■□□□□ 0.45
Clp1Q99LI9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.87■□□□□ 0.45
Clp1Q99LI9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.87■□□□□ 0.45
Clp1Q99LI9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clp1Q99LI9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clp1Q99LI9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.86■□□□□ 0.45
Clp1Q99LI9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clp1Q99LI9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clp1Q99LI9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.84■□□□□ 0.45
Clp1Q99LI9 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.84■□□□□ 0.45
Clp1Q99LI9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Gm6376-201ENSMUST00000209407 580 ntBASIC17.84■□□□□ 0.45
Clp1Q99LI9 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.84■□□□□ 0.45
Clp1Q99LI9 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.84■□□□□ 0.45
Clp1Q99LI9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clp1Q99LI9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clp1Q99LI9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clp1Q99LI9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clp1Q99LI9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clp1Q99LI9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clp1Q99LI9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Gm1401-201ENSMUST00000122048 772 ntBASIC17.83■□□□□ 0.44
Clp1Q99LI9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clp1Q99LI9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clp1Q99LI9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms