Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.91■□□□□ 0.3
Cstf1Q99LC2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.91■□□□□ 0.3
Cstf1Q99LC2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cstf1Q99LC2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cstf1Q99LC2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cstf1Q99LC2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Cstf1Q99LC2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cstf1Q99LC2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cstf1Q99LC2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
Cstf1Q99LC2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.89■□□□□ 0.29
Cstf1Q99LC2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cstf1Q99LC2 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Gm2651-201ENSMUST00000203560 838 ntBASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cstf1Q99LC2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cstf1Q99LC2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms