Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rfc4Q99J62 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.49■□□□□ 0.71
Rfc4Q99J62 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Gm27000-201ENSMUST00000182943 842 ntBASIC19.49■□□□□ 0.71
Rfc4Q99J62 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfc4Q99J62 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.49■□□□□ 0.71
Rfc4Q99J62 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.48■□□□□ 0.71
Rfc4Q99J62 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Gm13186-201ENSMUST00000118031 316 ntBASIC19.48■□□□□ 0.71
Rfc4Q99J62 Gm11452-201ENSMUST00000122376 690 ntBASIC19.48■□□□□ 0.71
Rfc4Q99J62 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Gm10052-201ENSMUST00000168019 960 ntBASIC19.48■□□□□ 0.71
Rfc4Q99J62 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Gm7729-201ENSMUST00000050143 801 ntBASIC19.48■□□□□ 0.71
Rfc4Q99J62 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfc4Q99J62 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc4Q99J62 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc4Q99J62 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc4Q99J62 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.47■□□□□ 0.71
Rfc4Q99J62 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc4Q99J62 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc4Q99J62 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.47■□□□□ 0.71
Rfc4Q99J62 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc4Q99J62 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc4Q99J62 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc4Q99J62 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfc4Q99J62 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Rfc4Q99J62 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Gm18733-201ENSMUST00000173950 856 ntBASIC19.46■□□□□ 0.71
Rfc4Q99J62 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.46■□□□□ 0.71
Rfc4Q99J62 AW822252-206ENSMUST00000208904 237 ntBASIC19.46■□□□□ 0.71
Rfc4Q99J62 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.46■□□□□ 0.71
Rfc4Q99J62 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfc4Q99J62 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms