Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Col20a1Q923P0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.02■□□□□ 0.79
Col20a1Q923P0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.02■□□□□ 0.79
Col20a1Q923P0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Col20a1Q923P0 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.02■□□□□ 0.79
Col20a1Q923P0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col20a1Q923P0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col20a1Q923P0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Col20a1Q923P0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.01■□□□□ 0.79
Col20a1Q923P0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col20a1Q923P0 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.01■□□□□ 0.79
Col20a1Q923P0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col20a1Q923P0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col20a1Q923P0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col20a1Q923P0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col20a1Q923P0 Gm18669-201ENSMUST00000216049 778 ntBASIC20.01■□□□□ 0.79
Col20a1Q923P0 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.01■□□□□ 0.79
Col20a1Q923P0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col20a1Q923P0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Col20a1Q923P0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Col20a1Q923P0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20■□□□□ 0.79
Col20a1Q923P0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20■□□□□ 0.79
Col20a1Q923P0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Col20a1Q923P0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20■□□□□ 0.79
Col20a1Q923P0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col20a1Q923P0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.99■□□□□ 0.79
Col20a1Q923P0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.99■□□□□ 0.79
Col20a1Q923P0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Gm44450-201ENSMUST00000199528 114 ntBASIC19.99■□□□□ 0.79
Col20a1Q923P0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col20a1Q923P0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Col20a1Q923P0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Col20a1Q923P0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col20a1Q923P0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col20a1Q923P0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col20a1Q923P0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col20a1Q923P0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col20a1Q923P0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col20a1Q923P0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Col20a1Q923P0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Col20a1Q923P0 Mir3081-201ENSMUST00000175305 84 ntBASIC19.97■□□□□ 0.79
Col20a1Q923P0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col20a1Q923P0 Gm28033-201ENSMUST00000184224 96 ntBASIC19.97■□□□□ 0.79
Col20a1Q923P0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Col20a1Q923P0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Col20a1Q923P0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col20a1Q923P0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col20a1Q923P0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col20a1Q923P0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms