Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb22Q91XZ8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb22Q91XZ8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.77■□□□□ 0.76
Pcdhb22Q91XZ8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Pcdhb22Q91XZ8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb22Q91XZ8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdhb22Q91XZ8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhb22Q91XZ8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb22Q91XZ8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhb22Q91XZ8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb22Q91XZ8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb22Q91XZ8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb22Q91XZ8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb22Q91XZ8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb22Q91XZ8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Pcdhb22Q91XZ8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb22Q91XZ8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Gm10231-201ENSMUST00000181584 441 ntBASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Gm10175-202ENSMUST00000208752 441 ntBASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb22Q91XZ8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Gm13186-201ENSMUST00000118031 316 ntBASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb22Q91XZ8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb22Q91XZ8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms