Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 Gm12382-201ENSMUST00000122005 922 ntBASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb4Q91XZ6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Gm5643-201ENSMUST00000117081 966 ntBASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Gm43183-201ENSMUST00000200632 547 ntBASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb4Q91XZ6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Gm4974-201ENSMUST00000209974 875 ntBASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb4Q91XZ6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Pcdhb4Q91XZ6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb4Q91XZ6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb4Q91XZ6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 Gm10517-202ENSMUST00000192970 758 ntBASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb4Q91XZ6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb4Q91XZ6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms