Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb4Q91XX6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb4Q91XX6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhgb4Q91XX6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhgb4Q91XX6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Gm7638-201ENSMUST00000121348 967 ntBASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Gm38027-201ENSMUST00000192315 235 ntBASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgb4Q91XX6 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgb4Q91XX6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgb4Q91XX6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhgb4Q91XX6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Pcdhgb4Q91XX6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.89■□□□□ 0.46
Pcdhgb4Q91XX6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhgb4Q91XX6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Gm715-201ENSMUST00000117865 831 ntBASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdhgb4Q91XX6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms