Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp40Q8R1F9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp40Q8R1F9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpp40Q8R1F9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpp40Q8R1F9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rpp40Q8R1F9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Gm13186-201ENSMUST00000118031 316 ntBASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp40Q8R1F9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 AA414768-201ENSMUST00000121924 1257 ntBASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rpp40Q8R1F9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms