Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.62■□□□□ 0.89
Col23a1Q8K4G2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col23a1Q8K4G2 Gm6550-201ENSMUST00000187574 993 ntBASIC20.62■□□□□ 0.89
Col23a1Q8K4G2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col23a1Q8K4G2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col23a1Q8K4G2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col23a1Q8K4G2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col23a1Q8K4G2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Gm14057-201ENSMUST00000120631 482 ntBASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col23a1Q8K4G2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Gm5186-201ENSMUST00000218781 920 ntBASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col23a1Q8K4G2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Gm15920-201ENSMUST00000118998 402 ntBASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col23a1Q8K4G2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col23a1Q8K4G2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
Col23a1Q8K4G2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Col23a1Q8K4G2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col23a1Q8K4G2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Col23a1Q8K4G2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col23a1Q8K4G2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col23a1Q8K4G2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.56■□□□□ 0.88
Col23a1Q8K4G2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col23a1Q8K4G2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col23a1Q8K4G2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.56■□□□□ 0.88
Col23a1Q8K4G2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms