Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim68Q8K243 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trim68Q8K243 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.38■□□□□ 0.53
Trim68Q8K243 Gm24841-201ENSMUST00000158676 357 ntBASIC18.38■□□□□ 0.53
Trim68Q8K243 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim68Q8K243 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim68Q8K243 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim68Q8K243 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim68Q8K243 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim68Q8K243 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim68Q8K243 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim68Q8K243 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim68Q8K243 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim68Q8K243 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim68Q8K243 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.37■□□□□ 0.53
Trim68Q8K243 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.37■□□□□ 0.53
Trim68Q8K243 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim68Q8K243 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim68Q8K243 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim68Q8K243 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim68Q8K243 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim68Q8K243 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim68Q8K243 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim68Q8K243 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim68Q8K243 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim68Q8K243 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim68Q8K243 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Trim68Q8K243 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim68Q8K243 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim68Q8K243 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim68Q8K243 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Trim68Q8K243 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim68Q8K243 Mir3081-201ENSMUST00000175305 84 ntBASIC18.35■□□□□ 0.53
Trim68Q8K243 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Trim68Q8K243 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim68Q8K243 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim68Q8K243 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim68Q8K243 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim68Q8K243 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim68Q8K243 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.35■□□□□ 0.53
Trim68Q8K243 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim68Q8K243 Gm24589-201ENSMUST00000116692 94 ntBASIC18.34■□□□□ 0.53
Trim68Q8K243 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim68Q8K243 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim68Q8K243 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.34■□□□□ 0.53
Trim68Q8K243 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim68Q8K243 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim68Q8K243 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim68Q8K243 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim68Q8K243 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim68Q8K243 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim68Q8K243 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim68Q8K243 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim68Q8K243 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim68Q8K243 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.33■□□□□ 0.52
Trim68Q8K243 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim68Q8K243 Mzt1-203ENSMUST00000227948 952 ntBASIC18.33■□□□□ 0.52
Trim68Q8K243 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms