Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Polr2bQ8CFI7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Polr2bQ8CFI7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.21■□□□□ 0.51
Polr2bQ8CFI7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Polr2bQ8CFI7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Polr2bQ8CFI7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Gm18032-201ENSMUST00000222541 538 ntBASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Polr2bQ8CFI7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Gm7977-201ENSMUST00000193787 748 ntBASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Polr2bQ8CFI7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Gm27000-201ENSMUST00000182943 842 ntBASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Gm7213-201ENSMUST00000215977 950 ntBASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Polr2bQ8CFI7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr2bQ8CFI7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Polr2bQ8CFI7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr2bQ8CFI7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Polr2bQ8CFI7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr2bQ8CFI7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr2bQ8CFI7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Polr2bQ8CFI7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr2bQ8CFI7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Polr2bQ8CFI7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms