Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nup88Q8CEC0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Nup88Q8CEC0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20■□□□□ 0.79
Nup88Q8CEC0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup88Q8CEC0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup88Q8CEC0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20■□□□□ 0.79
Nup88Q8CEC0 Gm10418-201ENSMUST00000100943 576 ntBASIC20■□□□□ 0.79
Nup88Q8CEC0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20■□□□□ 0.79
Nup88Q8CEC0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup88Q8CEC0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nup88Q8CEC0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup88Q8CEC0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20■□□□□ 0.79
Nup88Q8CEC0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup88Q8CEC0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup88Q8CEC0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup88Q8CEC0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Gm7889-201ENSMUST00000185591 958 ntBASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup88Q8CEC0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.98■□□□□ 0.79
Nup88Q8CEC0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Nup88Q8CEC0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup88Q8CEC0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms