Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Gm13168-201ENSMUST00000121771 632 ntBASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc38Q8CDN8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc38Q8CDN8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Gm12085-201ENSMUST00000119263 940 ntBASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Gm38027-201ENSMUST00000192315 235 ntBASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Gm9731-201ENSMUST00000209480 747 ntBASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc38Q8CDN8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc38Q8CDN8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Mir1199-201ENSMUST00000117015 119 ntBASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Gm7638-201ENSMUST00000121348 967 ntBASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc38Q8CDN8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc38Q8CDN8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ccdc38Q8CDN8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc38Q8CDN8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc38Q8CDN8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Ccdc38Q8CDN8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc38Q8CDN8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc38Q8CDN8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms