Protein–RNA interactions for Protein: Q8C2S7

Amigo3, Amphoterin-induced protein 3, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Amigo3Q8C2S7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Amigo3Q8C2S7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC22.7■■□□□ 1.22
Amigo3Q8C2S7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC22.7■■□□□ 1.22
Amigo3Q8C2S7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Amigo3Q8C2S7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC22.7■■□□□ 1.22
Amigo3Q8C2S7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Amigo3Q8C2S7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.22
Amigo3Q8C2S7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Amigo3Q8C2S7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Amigo3Q8C2S7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 AC154757.1-201ENSMUST00000228289 336 ntBASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Amigo3Q8C2S7 Gm37500-201ENSMUST00000192059 1443 ntBASIC22.67■■□□□ 1.22
Amigo3Q8C2S7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Amigo3Q8C2S7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Amigo3Q8C2S7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Amigo3Q8C2S7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Amigo3Q8C2S7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Amigo3Q8C2S7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Amigo3Q8C2S7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Amigo3Q8C2S7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC22.67■■□□□ 1.22
Amigo3Q8C2S7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 AC174742.1-201ENSMUST00000218272 304 ntBASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Amigo3Q8C2S7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Amigo3Q8C2S7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Amigo3Q8C2S7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Amigo3Q8C2S7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Amigo3Q8C2S7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Amigo3Q8C2S7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Amigo3Q8C2S7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Amigo3Q8C2S7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Amigo3Q8C2S7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC22.64■■□□□ 1.21
Amigo3Q8C2S7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC22.64■■□□□ 1.21
Amigo3Q8C2S7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Amigo3Q8C2S7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Amigo3Q8C2S7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Amigo3Q8C2S7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Amigo3Q8C2S7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 AC159106.1-201ENSMUST00000224421 690 ntBASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Amigo3Q8C2S7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Amigo3Q8C2S7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms