Protein–RNA interactions for Protein: Q8C1M2

Znf428, Zinc finger protein 428, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf428Q8C1M2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Znf428Q8C1M2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf428Q8C1M2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Idnk-204ENSMUST00000226010 1898 ntBASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Znf428Q8C1M2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf428Q8C1M2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Znf428Q8C1M2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Znf428Q8C1M2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Znf428Q8C1M2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Znf428Q8C1M2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Znf428Q8C1M2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Znf428Q8C1M2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Znf428Q8C1M2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Znf428Q8C1M2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Znf428Q8C1M2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Znf428Q8C1M2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Gm27000-201ENSMUST00000182943 842 ntBASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.19■□□□□ 0.82
Znf428Q8C1M2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf428Q8C1M2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf428Q8C1M2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf428Q8C1M2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Znf428Q8C1M2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Znf428Q8C1M2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf428Q8C1M2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf428Q8C1M2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf428Q8C1M2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf428Q8C1M2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms