Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptpn7Q8BUM3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.9■□□□□ 0.14
Ptpn7Q8BUM3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptpn7Q8BUM3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptpn7Q8BUM3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.9■□□□□ 0.14
Ptpn7Q8BUM3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ptpn7Q8BUM3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ptpn7Q8BUM3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ptpn7Q8BUM3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.89■□□□□ 0.14
Ptpn7Q8BUM3 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Gm42545-201ENSMUST00000202755 922 ntBASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Gm18025-201ENSMUST00000221733 862 ntBASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ptpn7Q8BUM3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ptpn7Q8BUM3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ptpn7Q8BUM3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Gm12382-201ENSMUST00000122005 922 ntBASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ptpn7Q8BUM3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms