Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trnp1Q80ZI1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnp1Q80ZI1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Gm6736-201ENSMUST00000166583 948 ntBASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trnp1Q80ZI1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trnp1Q80ZI1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Gm43575-201ENSMUST00000196420 516 ntBASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trnp1Q80ZI1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trnp1Q80ZI1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.08■□□□□ 0.65
Trnp1Q80ZI1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trnp1Q80ZI1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trnp1Q80ZI1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trnp1Q80ZI1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trnp1Q80ZI1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms