Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Otop1Q80VM9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Otop1Q80VM9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Otop1Q80VM9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.27■□□□□ 0.2
Otop1Q80VM9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Otop1Q80VM9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Otop1Q80VM9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Otop1Q80VM9 Mir8098-201ENSMUST00000184011 137 ntBASIC16.27■□□□□ 0.2
Otop1Q80VM9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Otop1Q80VM9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Otop1Q80VM9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.27■□□□□ 0.19
Otop1Q80VM9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Otop1Q80VM9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Otop1Q80VM9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Otop1Q80VM9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.26■□□□□ 0.19
Otop1Q80VM9 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.26■□□□□ 0.19
Otop1Q80VM9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Otop1Q80VM9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Otop1Q80VM9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.25■□□□□ 0.19
Otop1Q80VM9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Gm27459-201ENSMUST00000184860 107 ntBASIC16.25■□□□□ 0.19
Otop1Q80VM9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Otop1Q80VM9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.24■□□□□ 0.19
Otop1Q80VM9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Gm13884-201ENSMUST00000118103 829 ntBASIC16.24■□□□□ 0.19
Otop1Q80VM9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.24■□□□□ 0.19
Otop1Q80VM9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.24■□□□□ 0.19
Otop1Q80VM9 AW822252-206ENSMUST00000208904 237 ntBASIC16.24■□□□□ 0.19
Otop1Q80VM9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Otop1Q80VM9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Otop1Q80VM9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Gm43347-201ENSMUST00000200226 580 ntBASIC16.23■□□□□ 0.19
Otop1Q80VM9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.23■□□□□ 0.19
Otop1Q80VM9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Otop1Q80VM9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Otop1Q80VM9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Otop1Q80VM9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms