Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.85□□□□□ -0.19
Vma21Q78T54 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vma21Q78T54 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vma21Q78T54 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vma21Q78T54 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vma21Q78T54 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vma21Q78T54 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.85□□□□□ -0.19
Vma21Q78T54 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Vma21Q78T54 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.84□□□□□ -0.19
Vma21Q78T54 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 Dio3-201ENSMUST00000097228 1449 ntBASIC13.84□□□□□ -0.19
Vma21Q78T54 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Vma21Q78T54 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vma21Q78T54 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.84□□□□□ -0.19
Vma21Q78T54 Gm37179-201ENSMUST00000194862 823 ntBASIC13.84□□□□□ -0.19
Vma21Q78T54 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.84□□□□□ -0.19
Vma21Q78T54 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 Haglr-201ENSMUST00000100000 2085 ntBASIC13.84□□□□□ -0.19
Vma21Q78T54 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vma21Q78T54 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vma21Q78T54 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Vma21Q78T54 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vma21Q78T54 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Vma21Q78T54 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vma21Q78T54 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vma21Q78T54 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vma21Q78T54 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vma21Q78T54 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vma21Q78T54 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vma21Q78T54 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vma21Q78T54 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.83□□□□□ -0.2
Vma21Q78T54 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.83□□□□□ -0.2
Vma21Q78T54 Gm12896-201ENSMUST00000118430 226 ntBASIC13.83□□□□□ -0.2
Vma21Q78T54 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.83□□□□□ -0.2
Vma21Q78T54 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vma21Q78T54 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vma21Q78T54 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vma21Q78T54 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vma21Q78T54 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Vma21Q78T54 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vma21Q78T54 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vma21Q78T54 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.83□□□□□ -0.2
Vma21Q78T54 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vma21Q78T54 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vma21Q78T54 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Vma21Q78T54 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Vma21Q78T54 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.82□□□□□ -0.2
Vma21Q78T54 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.82□□□□□ -0.2
Vma21Q78T54 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Vma21Q78T54 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vma21Q78T54 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Vma21Q78T54 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vma21Q78T54 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vma21Q78T54 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vma21Q78T54 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vma21Q78T54 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vma21Q78T54 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vma21Q78T54 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vma21Q78T54 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vma21Q78T54 Gm13158-201ENSMUST00000122007 736 ntBASIC13.81□□□□□ -0.2
Vma21Q78T54 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.81□□□□□ -0.2
Vma21Q78T54 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.81□□□□□ -0.2
Vma21Q78T54 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vma21Q78T54 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vma21Q78T54 Gm10602-201ENSMUST00000098239 609 ntBASIC13.81□□□□□ -0.2
Vma21Q78T54 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.81□□□□□ -0.2
Vma21Q78T54 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vma21Q78T54 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vma21Q78T54 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vma21Q78T54 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vma21Q78T54 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vma21Q78T54 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vma21Q78T54 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.8□□□□□ -0.2
Vma21Q78T54 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms