Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.36■□□□□ 0.53
ShbQ6PD21 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ShbQ6PD21 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.36■□□□□ 0.53
ShbQ6PD21 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.36■□□□□ 0.53
ShbQ6PD21 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.36■□□□□ 0.53
ShbQ6PD21 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ShbQ6PD21 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ShbQ6PD21 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.35■□□□□ 0.53
ShbQ6PD21 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.35■□□□□ 0.53
ShbQ6PD21 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
ShbQ6PD21 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.35■□□□□ 0.53
ShbQ6PD21 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.35■□□□□ 0.53
ShbQ6PD21 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ShbQ6PD21 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.34■□□□□ 0.53
ShbQ6PD21 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.34■□□□□ 0.53
ShbQ6PD21 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.34■□□□□ 0.53
ShbQ6PD21 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ShbQ6PD21 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.34■□□□□ 0.53
ShbQ6PD21 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.34■□□□□ 0.53
ShbQ6PD21 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ShbQ6PD21 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ShbQ6PD21 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ShbQ6PD21 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ShbQ6PD21 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ShbQ6PD21 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ShbQ6PD21 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.33■□□□□ 0.52
ShbQ6PD21 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ShbQ6PD21 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ShbQ6PD21 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.33■□□□□ 0.52
ShbQ6PD21 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ShbQ6PD21 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.33■□□□□ 0.52
ShbQ6PD21 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ShbQ6PD21 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ShbQ6PD21 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ShbQ6PD21 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ShbQ6PD21 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ShbQ6PD21 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ShbQ6PD21 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ShbQ6PD21 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
ShbQ6PD21 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ShbQ6PD21 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Gm11780-201ENSMUST00000136880 516 ntBASIC18.32■□□□□ 0.52
ShbQ6PD21 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ShbQ6PD21 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.32■□□□□ 0.52
ShbQ6PD21 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ShbQ6PD21 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShbQ6PD21 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShbQ6PD21 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.31■□□□□ 0.52
ShbQ6PD21 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShbQ6PD21 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShbQ6PD21 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShbQ6PD21 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShbQ6PD21 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShbQ6PD21 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShbQ6PD21 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShbQ6PD21 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms