Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Herc4Q6PAV2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.75■□□□□ 0.59
Herc4Q6PAV2 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.75■□□□□ 0.59
Herc4Q6PAV2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Herc4Q6PAV2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.75■□□□□ 0.59
Herc4Q6PAV2 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.75■□□□□ 0.59
Herc4Q6PAV2 Gm10252-201ENSMUST00000209541 832 ntBASIC18.75■□□□□ 0.59
Herc4Q6PAV2 Gm30025-201ENSMUST00000218555 728 ntBASIC18.75■□□□□ 0.59
Herc4Q6PAV2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Herc4Q6PAV2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Herc4Q6PAV2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Herc4Q6PAV2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Herc4Q6PAV2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Herc4Q6PAV2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Herc4Q6PAV2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Herc4Q6PAV2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Herc4Q6PAV2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Herc4Q6PAV2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms