Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Casc4Q6P2L7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Casc4Q6P2L7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Casc4Q6P2L7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Mir7071-201ENSMUST00000184847 69 ntBASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.17■□□□□ 0.34
Casc4Q6P2L7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Casc4Q6P2L7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Gm11539-201ENSMUST00000119837 557 ntBASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Gm13436-201ENSMUST00000120418 567 ntBASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Casc4Q6P2L7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Gm17661-201ENSMUST00000170317 270 ntBASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Gm43799-201ENSMUST00000201845 579 ntBASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Gm9731-201ENSMUST00000209480 747 ntBASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Gm7791-201ENSMUST00000219066 539 ntBASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Casc4Q6P2L7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Casc4Q6P2L7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Casc4Q6P2L7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms