Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.31■□□□□ 0.36
Cep290Q6A078 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.31■□□□□ 0.36
Cep290Q6A078 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cep290Q6A078 Gm10355-201ENSMUST00000097146 517 ntBASIC17.31■□□□□ 0.36
Cep290Q6A078 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cep290Q6A078 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cep290Q6A078 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cep290Q6A078 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.31■□□□□ 0.36
Cep290Q6A078 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cep290Q6A078 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.31■□□□□ 0.36
Cep290Q6A078 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.31■□□□□ 0.36
Cep290Q6A078 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cep290Q6A078 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cep290Q6A078 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.31■□□□□ 0.36
Cep290Q6A078 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.31■□□□□ 0.36
Cep290Q6A078 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cep290Q6A078 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cep290Q6A078 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.3■□□□□ 0.36
Cep290Q6A078 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.3■□□□□ 0.36
Cep290Q6A078 Gm44430-201ENSMUST00000203376 995 ntBASIC17.3■□□□□ 0.36
Cep290Q6A078 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cep290Q6A078 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cep290Q6A078 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cep290Q6A078 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cep290Q6A078 Gm13418-201ENSMUST00000119097 944 ntBASIC17.3■□□□□ 0.36
Cep290Q6A078 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cep290Q6A078 AA543401-201ENSMUST00000164248 1269 ntBASIC17.3■□□□□ 0.36
Cep290Q6A078 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.3■□□□□ 0.36
Cep290Q6A078 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.3■□□□□ 0.36
Cep290Q6A078 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cep290Q6A078 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cep290Q6A078 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cep290Q6A078 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cep290Q6A078 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cep290Q6A078 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cep290Q6A078 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cep290Q6A078 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.29■□□□□ 0.36
Cep290Q6A078 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cep290Q6A078 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cep290Q6A078 Mir6956-201ENSMUST00000183598 62 ntBASIC17.29■□□□□ 0.36
Cep290Q6A078 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.29■□□□□ 0.36
Cep290Q6A078 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.29■□□□□ 0.36
Cep290Q6A078 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cep290Q6A078 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cep290Q6A078 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 AV026068-213ENSMUST00000223675 1171 ntBASIC17.28■□□□□ 0.36
Cep290Q6A078 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.28■□□□□ 0.36
Cep290Q6A078 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.28■□□□□ 0.36
Cep290Q6A078 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Cep290Q6A078 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cep290Q6A078 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.28■□□□□ 0.36
Cep290Q6A078 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cep290Q6A078 Gm27000-201ENSMUST00000182943 842 ntBASIC17.28■□□□□ 0.36
Cep290Q6A078 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Gm8396-201ENSMUST00000057361 823 ntBASIC17.28■□□□□ 0.36
Cep290Q6A078 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cep290Q6A078 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
Cep290Q6A078 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cep290Q6A078 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cep290Q6A078 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.27■□□□□ 0.36
Cep290Q6A078 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.27■□□□□ 0.36
Cep290Q6A078 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.27■□□□□ 0.36
Cep290Q6A078 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cep290Q6A078 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cep290Q6A078 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cep290Q6A078 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cep290Q6A078 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.27■□□□□ 0.36
Cep290Q6A078 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cep290Q6A078 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cep290Q6A078 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms