Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxn1Q61575 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxn1Q61575 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Foxn1Q61575 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.36■□□□□ 0.69
Foxn1Q61575 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxn1Q61575 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Foxn1Q61575 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.36■□□□□ 0.69
Foxn1Q61575 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxn1Q61575 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxn1Q61575 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Foxn1Q61575 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxn1Q61575 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.36■□□□□ 0.69
Foxn1Q61575 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxn1Q61575 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Foxn1Q61575 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Foxn1Q61575 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Foxn1Q61575 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxn1Q61575 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Foxn1Q61575 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Foxn1Q61575 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.35■□□□□ 0.69
Foxn1Q61575 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxn1Q61575 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Foxn1Q61575 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxn1Q61575 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Foxn1Q61575 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Foxn1Q61575 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Foxn1Q61575 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.34■□□□□ 0.69
Foxn1Q61575 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.34■□□□□ 0.69
Foxn1Q61575 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Foxn1Q61575 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Foxn1Q61575 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Foxn1Q61575 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Foxn1Q61575 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxn1Q61575 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Foxn1Q61575 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxn1Q61575 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxn1Q61575 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxn1Q61575 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.33■□□□□ 0.69
Foxn1Q61575 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.33■□□□□ 0.69
Foxn1Q61575 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxn1Q61575 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxn1Q61575 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxn1Q61575 Gm13186-201ENSMUST00000118031 316 ntBASIC19.33■□□□□ 0.68
Foxn1Q61575 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.33■□□□□ 0.68
Foxn1Q61575 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.33■□□□□ 0.68
Foxn1Q61575 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.33■□□□□ 0.68
Foxn1Q61575 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxn1Q61575 Gm15590-201ENSMUST00000078419 552 ntBASIC19.33■□□□□ 0.68
Foxn1Q61575 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Foxn1Q61575 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.33■□□□□ 0.68
Foxn1Q61575 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Foxn1Q61575 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.32■□□□□ 0.68
Foxn1Q61575 Gm14140-201ENSMUST00000119999 995 ntBASIC19.32■□□□□ 0.68
Foxn1Q61575 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Gm9727-201ENSMUST00000161387 555 ntBASIC19.32■□□□□ 0.68
Foxn1Q61575 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Gm7230-201ENSMUST00000173026 815 ntBASIC19.32■□□□□ 0.68
Foxn1Q61575 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.32■□□□□ 0.68
Foxn1Q61575 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Foxn1Q61575 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.32■□□□□ 0.68
Foxn1Q61575 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.32■□□□□ 0.68
Foxn1Q61575 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Foxn1Q61575 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxn1Q61575 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.32■□□□□ 0.68
Foxn1Q61575 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxn1Q61575 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxn1Q61575 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.31■□□□□ 0.68
Foxn1Q61575 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxn1Q61575 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxn1Q61575 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.31■□□□□ 0.68
Foxn1Q61575 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxn1Q61575 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Foxn1Q61575 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.31■□□□□ 0.68
Foxn1Q61575 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms