Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Traf4Q61382 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Traf4Q61382 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Traf4Q61382 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Traf4Q61382 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Traf4Q61382 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Traf4Q61382 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.05■□□□□ 0
Traf4Q61382 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Traf4Q61382 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Traf4Q61382 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.05■□□□□ -0
Traf4Q61382 Gm11539-201ENSMUST00000119837 557 ntBASIC15.05■□□□□ -0
Traf4Q61382 Gm13436-201ENSMUST00000120418 567 ntBASIC15.05■□□□□ -0
Traf4Q61382 Gm13559-201ENSMUST00000120476 863 ntBASIC15.05■□□□□ -0
Traf4Q61382 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Traf4Q61382 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.05■□□□□ -0
Traf4Q61382 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.05■□□□□ -0
Traf4Q61382 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Traf4Q61382 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Traf4Q61382 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.04■□□□□ -0
Traf4Q61382 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.04■□□□□ -0
Traf4Q61382 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Traf4Q61382 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Traf4Q61382 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.03■□□□□ -0
Traf4Q61382 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.03■□□□□ -0
Traf4Q61382 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Traf4Q61382 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.03■□□□□ -0
Traf4Q61382 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.03■□□□□ -0
Traf4Q61382 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf4Q61382 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf4Q61382 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Traf4Q61382 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf4Q61382 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.02■□□□□ -0
Traf4Q61382 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf4Q61382 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.02■□□□□ -0
Traf4Q61382 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Traf4Q61382 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.02■□□□□ -0
Traf4Q61382 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.02■□□□□ -0
Traf4Q61382 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf4Q61382 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf4Q61382 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf4Q61382 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Traf4Q61382 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf4Q61382 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf4Q61382 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf4Q61382 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf4Q61382 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf4Q61382 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf4Q61382 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Traf4Q61382 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf4Q61382 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf4Q61382 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf4Q61382 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.01□□□□□ -0.01
Traf4Q61382 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.01□□□□□ -0.01
Traf4Q61382 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.01□□□□□ -0.01
Traf4Q61382 Gm8969-201ENSMUST00000199694 526 ntBASIC15.01□□□□□ -0.01
Traf4Q61382 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms