Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.78■□□□□ 0.6
Ift88Q61371 Gm12382-201ENSMUST00000122005 922 ntBASIC18.78■□□□□ 0.6
Ift88Q61371 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.78■□□□□ 0.6
Ift88Q61371 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.78■□□□□ 0.6
Ift88Q61371 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ift88Q61371 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ift88Q61371 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ift88Q61371 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ift88Q61371 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ift88Q61371 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ift88Q61371 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ift88Q61371 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ift88Q61371 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ift88Q61371 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.77■□□□□ 0.6
Ift88Q61371 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ift88Q61371 Gm10517-202ENSMUST00000192970 758 ntBASIC18.77■□□□□ 0.6
Ift88Q61371 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ift88Q61371 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ift88Q61371 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ift88Q61371 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Ift88Q61371 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ift88Q61371 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ift88Q61371 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Ift88Q61371 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ift88Q61371 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.76■□□□□ 0.59
Ift88Q61371 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ift88Q61371 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ift88Q61371 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ift88Q61371 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ift88Q61371 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ift88Q61371 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.76■□□□□ 0.59
Ift88Q61371 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ift88Q61371 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ift88Q61371 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ift88Q61371 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ift88Q61371 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ift88Q61371 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ift88Q61371 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ift88Q61371 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ift88Q61371 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.75■□□□□ 0.59
Ift88Q61371 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.75■□□□□ 0.59
Ift88Q61371 Gm24841-201ENSMUST00000158676 357 ntBASIC18.75■□□□□ 0.59
Ift88Q61371 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.75■□□□□ 0.59
Ift88Q61371 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ift88Q61371 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ift88Q61371 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ift88Q61371 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.74■□□□□ 0.59
Ift88Q61371 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ift88Q61371 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.74■□□□□ 0.59
Ift88Q61371 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ift88Q61371 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ift88Q61371 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ift88Q61371 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms